Catalytic RNAs, RNA Splicing and Retroelements:

Structure, Function, Evolution, and Applications

Our laboratory studies gene expression, RNA splicing, autocatalytic introns, and retroviral-like genetic elements in eukaryotes and prokaryotes. We are interested in mechanisms of RNA catalysis, how proteins assist the folding of RNAs into active structures, mechanisms of intron mobility to new genomic site, the evolution of introns and splicing mechanisms, and the evolutionary origin of retroviruses and reverse transcription. Our research employs a combination of genetic, biochemical, and structural approaches. In practical applications of our work, we have used mobile group II introns to develop a new type of gene targeting vector, dubbed "targetron", which can be programmed to insert efficiently into desired DNA sites. Targetrons are now sold commercially. They are widely used in academic laboratories and industry for the genetic engineering and systems biology of bacteria, and we are developing methods for using them in higher organisms, including human cells. Recently, we have been developing new thermostable group II intron reverse transcriptases as tools for applications in next-generation RNA sequencing, miRNA profiling, and diagnostics. 








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updated 10/16/12
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